If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ), 'gf_id' => 'HOM05D000530', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000530' ), 'data_identifier' => 'HOM05D000530', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000530', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1029', 'num_species' => '95' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p15770' => 'bna', 'A02p34800' => 'bna', 'A03p22370' => 'bna', 'A03p27600' => 'bna', 'A03p30580' => 'bna', 'A04p00400' => 'bna', 'A04p30190' => 'bna', 'A04p30200' => 'bna', 'A05p06480' => 'bna', 'A07p26180' => 'bna', 'A08p25540' => 'bna', 'A08p32610' => 'bna', 'A09p02480' => 'bna', 'A09p54830' => 'bna', 'A09p63600' => 'bna', 'A09p63610' => 'bna', 'Aa31LG10G10790' => 'aar', 'Aa31LG10G16770' => 'aar', 'Aa31LG10G16780' => 'aar', 'Aa31LG5G19680' => 'aar', 'Aa31LG5G2690' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.691' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2111' => 'aag', 'Actinidia00695' => 'ach', 'Actinidia00933' => 'ach', 'Actinidia05570' => 'ach', 'Actinidia10361' => 'ach', 'Actinidia13917' => 'ach', 'Actinidia13918' => 'ach', 'Actinidia21076' => 'ach', 'Actinidia22129' => 'ach', 'Actinidia24284' => 'ach', 'Actinidia24852' => 'ach', 'Actinidia26992' => 'ach', 'Actinidia26993' => 'ach', 'Actinidia29607' => 'ach', 'Actinidia29676' => 'ach', 'Actinidia30804' => 'ach', 'Actinidia33110' => 'ach', 'Actinidia33111' => 'ach', 'Actinidia33945' => 'ach', 'Actinidia36240' => 'ach', 'Ah.04g160080' => 'amhyb', 'Ah.06g192870' => 'amhyb', 'Ah.09g236160' => 'amhyb', 'Ah.16g103090' => 'amhyb', 'AL1G24260' => 'aly', 'AL1G24460' => 'aly', 'AL4G37520' => 'aly', 'AL5G15690' => 'aly', 'AL5G45760' => 'aly', 'AL6G49750' => 'aly', 'AL7G28830' => 'aly', 'AL8G23950' => 'aly', 'Aqoxy179s002' => 'aox', 'Aqoxy179s003' => 'aox', 'Aqoxy1G03891' => 'aox', 'Aqoxy2G03094' => 'aox', 'Aqoxy4G02618' => 'aox', 'Aqoxy4G02665' => 'aox', 'Aqoxy4G02666' => 'aox', 'Aqoxy58s002' => 'aox', 'Aqoxy5G00613' => 'aox', 'Aqoxy5G01340' => 'aox', 'Aqoxy5G03207' => 'aox', 'Aqoxy6G01470' => 'aox', 'Aqoxy6G01473' => 'aox', 'arahy.Tifrunner.gnm1.ann1.0B12YU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3DA9LK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3K90ML' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3X0QME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8IM4PM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C2JUAG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F7NR6L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JSKR0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KW7RVG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NN0MCR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QG43ZZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDRH1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RTE7SH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T7DUYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TEE9DH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U5S3ED' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X5FAHR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y9S2IA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YLH7N2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZE2ILJ' => 'arhy', 'AT1G12820' => 'ath', 'AT2G39940' => 'ath', 'AT3G26810' => 'ath', 'AT3G62980' => 'ath', 'AT4G03190' => 'ath', 'AT4G24390' => 'ath', 'AT5G49980' => 'ath', 'ATR0022G022' => 'atr', 'ATR0582G116' => 'atr', 'ATR0618G352' => 'atr', 'ATR0693G229' => 'atr', 'Atru.chr10.2016' => 'acertr', 'Atru.chr10.2017' => 'acertr', 'Atru.chr12.244' => 'acertr', 'Atru.chr13.1057' => 'acertr', 'Atru.chr5.1271' => 'acertr', 'Atru.chr6.2632' => 'acertr', 'AUR62000938' => 'cqu', 'AUR62005029' => 'cqu', 'AUR62010874' => 'cqu', 'AUR62012205' => 'cqu', 'AUR62014716' => 'cqu', 'AUR62016895' => 'cqu', 'AUR62019004' => 'cqu', 'AUR62021387' => 'cqu', 'AUR62022838' => 'cqu', 'AUR62027846' => 'cqu', 'AUR62034696' => 'cqu', 'AUR62037846' => 'cqu', 'AUR62041085' => 'cqu', 'AUR62044564' => 'cqu', 'AUR62044616' => 'cqu', 'BcaB01g01974' => 'bca', 'BcaB01g02512' => 'bca', 'BcaB01g02928' => 'bca', 'BcaB01g03580' => 'bca', 'BcaB02g07305' => 'bca', 'BcaB02g08083' => 'bca', 'BcaB02g09068' => 'bca', 'BcaB02g09069' => 'bca', 'BcaB03g13165' => 'bca', 'BcaB03g16560' => 'bca', 'BcaB06g29117' => 'bca', 'BcaB07g30208' => 'bca', 'BcaB08g34249' => 'bca', 'BcaB08g35446' => 'bca', 'BcaC01g00055' => 'bca', 'BcaC01g03168' => 'bca', 'BcaC01g04839' => 'bca', 'BcaC01g05453' => 'bca', 'BcaC01g06700' => 'bca', 'BcaC02g07380' => 'bca', 'BcaC02g07381' => 'bca', 'BcaC02g07382' => 'bca', 'BcaC02g07383' => 'bca', 'BcaC02g07384' => 'bca', 'BcaC02g10331' => 'bca', 'BcaC02g10471' => 'bca', 'BcaC03g17392' => 'bca', 'BcaC04g23995' => 'bca', 'BcaC07g40272' => 'bca', 'BcaC07g41678' => 'bca', 'BcaC07g42721' => 'bca', 'BcaC07g42724' => 'bca', 'BcaC07g42725' => 'bca', 'BcaC08g45251' => 'bca', 'BcaC09g50871' => 'bca', 'BolC1t01899H' => 'bol', 'BolC2t11410H' => 'bol', 'BolC3t15037H' => 'bol', 'BolC3t15653H' => 'bol', 'BolC3t16010H' => 'bol', 'BolC3t17816H' => 'bol', 'BolC3t19779H' => 'bol', 'BolC4t22373H' => 'bol', 'BolC4t24393H' => 'bol', 'BolC4t24557H' => 'bol', 'BolC4t28268H' => 'bol', 'BolC4t28270H' => 'bol', 'BolC6t38017H' => 'bol', 'BolC8t49194H' => 'bol', 'BolC8t50970H' => 'bol', 'BolC8t51352H' => 'bol', 'BolC8t52249H' => 'bol', 'BolC9t53188H' => 'bol', 'BraA01t01513Z' => 'bra', 'BraA02t07502Z' => 'bra', 'BraA02t08487Z' => 'bra', 'BraA03t11467Z' => 'bra', 'BraA03t11973Z' => 'bra', 'BraA03t12238Z' => 'bra', 'BraA04t15758Z' => 'bra', 'BraA04t18489Z' => 'bra', 'BraA04t18490Z' => 'bra', 'BraA05t19616Z' => 'bra', 'BraA07t30264Z' => 'bra', 'BraA08t35185Z' => 'bra', 'BraA09t35895Z' => 'bra', 'BraA09t40892Z' => 'bra', 'BraA09t41710Z' => 'bra', 'C01p19720' => 'bna', 'C02p53360' => 'bna', 'C03p26510' => 'bna', 'C03p33310' => 'bna', 'C03p37120' => 'bna', 'C03p55410' => 'bna', 'C04p07560' => 'bna', 'C04p28490' => 'bna', 'C04p30250' => 'bna', 'C04p67660' => 'bna', 'C04p67670' => 'bna', 'C06p28480' => 'bna', 'C08p15670' => 'bna', 'C08p33700' => 'bna', 'C08p37690' => 'bna', 'C08p47100' => 'bna', 'C09p02580' => 'bna', 'CAN.G1006.27' => 'can', 'CAN.G1209.35' => 'can', 'CAN.G1440.1' => 'can', 'CAN.G1440.5' => 'can', 'CAN.G1440.6' => 'can', 'CAN.G1443.13' => 'can', 'CAN.G1443.22' => 'can', 'CAN.G1449.14' => 'can', 'CAN.G1574.5' => 'can', 'CAN.G1617.2' => 'can', 'CAN.G1646.12' => 'can', 'CAN.G1646.5' => 'can', 'CAN.G1679.2' => 'can', 'CAN.G1697.4' => 'can', 'CAN.G1768.9' => 'can', 'CAN.G1926.5' => 'can', 'CAN.G1926.8' => 'can', 'CAN.G3004.1' => 'can', 'CAN.G3168.1' => 'can', 'CAN.G424.18' => 'can', 'CAN.G426.32' => 'can', 'CAN.G473.151' => 'can', 'CAN.G4913.1' => 'can', 'CAN.G738.6' => 'can', 'CAN.G741.10' => 'can', 'CAN.G741.19' => 'can', 'CAN.G741.23' => 'can', 'CAN.G741.36' => 'can', 'CAN.G741.6' => 'can', 'CAN.G741.9' => 'can', 'CANSAT25G0567' => 'cansat', 'CANSAT25G3200' => 'cansat', 'CANSAT56G0011' => 'cansat', 'CANSAT56G0605' => 'cansat', 'CARHR013140' => 'chi', 'CARHR134860' => 'chi', 'CARHR147890' => 'chi', 'CARHR173270' => 'chi', 'CARHR231800' => 'chi', 'CARHR251620' => 'chi', 'CARHR258730' => 'chi', 'Carub.0001s1256' => 'cru', 'Carub.0004s2207' => 'cru', 'Carub.0005s0486' => 'cru', 'Carub.0005s2963' => 'cru', 'Carub.0006s3387' => 'cru', 'Carub.0007s1666' => 'cru', 'Carub.0008s0988' => 'cru', 'Ca_05368_v3' => 'car', 'Ca_05930_v3' => 'car', 'Ca_08119_v3' => 'car', 'Ca_10363_v3' => 'car', 'Ca_17145_v3' => 'car', 'Ca_18479_v3' => 'car', 'Ca_30233_v3' => 'car', 'Cc01_g20300' => 'ccan', 'Cc02_g06930' => 'ccan', 'Cc02_g12380' => 'ccan', 'Cc04_g11600' => 'ccan', 'Cc05_g03230' => 'ccan', 'Cc07_g01170' => 'ccan', 'Cc07_g15710' => 'ccan', 'Cc10_g15520' => 'ccan', 'CDE02G1856' => 'cde', 'CDE02G4287' => 'cde', 'CDE03G0057' => 'cde', 'CDE04G2854' => 'cde', 'CDE05G0294' => 'cde', 'CDE05G2700' => 'cde', 'CDE06G1568' => 'cde', 'CDE09G0163' => 'cde', 'CDE09G0305' => 'cde', 'CDE09G1248' => 'cde', 'CDE11G0024' => 'cde', 'Cfa000348' => 'cfa', 'Cfa001368' => 'cfa', 'Cfa006026' => 'cfa', 'Cfa007181' => 'cfa', 'Cfa013707' => 'cfa', 'Ciclev10000564m.g' => 'ccl', 'Ciclev10014716m.g' => 'ccl', 'Ciclev10014739m.g' => 'ccl', 'Ciclev10014749m.g' => 'ccl', 'Ciclev10019437m.g' => 'ccl', 'Ciclev10031013m.g' => 'ccl', 'CiPaw.01G295600' => 'cil', 'CiPaw.02G189700' => 'cil', 'CiPaw.03G003400' => 'cil', 'CiPaw.04G002200' => 'cil', 'CiPaw.07G100800' => 'cil', 'CiPaw.07G169000' => 'cil', 'CiPaw.08G053600' => 'cil', 'CiPaw.08G100000' => 'cil', 'CiPaw.10G118900' => 'cil', 'ClCG01G022530' => 'cla', 'ClCG05G012800' => 'cla', 'ClCG07G003980' => 'cla', 'ClCG09G006450' => 'cla', 'ClCG11G014420' => 'cla', 'ClCG11G014430' => 'cla', 'COL.COLO4_08020' => 'col', 'COL.COLO4_11960' => 'col', 'COL.COLO4_13340' => 'col', 'COL.COLO4_25663' => 'col', 'COL.COLO4_31589' => 'col', 'COL.COLO4_31590' => 'col', 'COL.COLO4_32087' => 'col', 'COL.COLO4_32088' => 'col', 'Cpa.g.sc19.214' => 'cpa', 'Cpa.g.sc27.130' => 'cpa', 'Cpa.g.sc70.88' => 'cpa', 'Cpa.g.sc827.1' => 'cpa', 'Cpa.g.sc9.171' => 'cpa', 'CsaV3_3G027660' => 'csa', 'CsaV3_3G047830' => 'csa', 'CsaV3_3G047850' => 'csa', 'CsaV3_5G008910' => 'csa', 'CsaV3_6G049730' => 'csa', 'CsaV3_7G028700' => 'csa', 'CSS0004040' => 'camsi', 'CSS0007560' => 'camsi', 'CSS0016067' => 'camsi', 'CSS0021356' => 'camsi', 'CSS0025107' => 'camsi', 'CSS0028417' => 'camsi', 'CSS0031725' => 'camsi', 'CSS0039207' => 'camsi', 'CSS0047444' => 'camsi', 'CSS0049287' => 'camsi', 'DCAR_001386' => 'dca', 'DCAR_001970' => 'dca', 'DCAR_003381' => 'dca', 'DCAR_004140' => 'dca', 'DCAR_008072' => 'dca', 'DCAR_011788' => 'dca', 'DCAR_012425' => 'dca', 'DCAR_012874' => 'dca', 'DCAR_016627' => 'dca', 'DCAR_018358' => 'dca', 'DCAR_019294' => 'dca', 'DCAR_027555' => 'dca', 'DCAR_028134' => 'dca', 'DCAR_029898' => 'dca', 'DCAR_032136' => 'dca', 'Dinv05729' => 'din', 'Dinv11307' => 'din', 'Dinv18992' => 'din', 'Dinv20954' => 'din', 'Dinv20989' => 'din', 'Dinv25623' => 'din', 'Dinv32999' => 'din', 'Dinv33293' => 'din', 'Dinv34424' => 'din', 'Dinv40475' => 'din', 'Dinv42643' => 'din', 'Dinv44831' => 'din', 'Duzib041G0376' => 'dzi', 'Duzib106G0489' => 'dzi', 'Duzib114G0470' => 'dzi', 'Duzib116G0250' => 'dzi', 'Duzib133G1370' => 'dzi', 'Duzib147G1531' => 'dzi', 'Duzib160G0807' => 'dzi', 'Duzib187G0598' => 'dzi', 'Duzib211G0421' => 'dzi', 'Duzib235G0219' => 'dzi', 'Duzib264G0469' => 'dzi', 'ECA232G1693' => 'eca', 'ECA233G1279' => 'eca', 'ECA233G1612' => 'eca', 'ECA234G3530' => 'eca', 'ECA236G1781' => 'eca', 'ECA238G0985' => 'eca', 'ECA238G1471' => 'eca', 'ECA246G3841' => 'eca', 'ECA247G0953' => 'eca', 'ECA247G1013' => 'eca', 'ECA247G2477' => 'eca', 'ECA247G3131' => 'eca', 'ECA248G0721' => 'eca', 'ECA248G2962' => 'eca', 'EL10Ac1g01098' => 'bvu', 'EL10Ac2g04785' => 'bvu', 'EL10Ac4g09234' => 'bvu', 'EL10Ac5g11729' => 'bvu', 'EL10Ac6g13380' => 'bvu', 'EL10Ac8g20534' => 'bvu', 'Eucgr.D00716' => 'egr', 'Eucgr.D00718' => 'egr', 'Eucgr.G01952' => 'egr', 'Eucgr.G03030' => 'egr', 'Eucgr.K03439' => 'egr', 'FAN01G1427' => 'fan', 'FAN02G3374' => 'fan', 'FAN03G0778' => 'fan', 'FAN04G0933' => 'fan', 'FAN05G2093' => 'fan', 'FAN06G2003' => 'fan', 'FAN08G0768' => 'fan', 'FAN09G0869' => 'fan', 'FAN10G0295' => 'fan', 'FAN10G1885' => 'fan', 'FAN13G2376' => 'fan', 'FAN14G5536' => 'fan', 'FAN15G1521' => 'fan', 'FAN18G4562' => 'fan', 'FAN20G2014' => 'fan', 'FAN24G0775' => 'fan', 'FAN27G1781' => 'fan', 'FvH4_2g24840' => 'fve', 'FvH4_5g35920' => 'fve', 'FvH4_6g54140' => 'fve', 'FvH4_7g24000' => 'fve', 'Glyma.02G065300' => 'gma', 'Glyma.02G152800' => 'gma', 'Glyma.02G211800' => 'gma', 'Glyma.02G254300' => 'gma', 'Glyma.03G209400' => 'gma', 'Glyma.04G093500' => 'gma', 'Glyma.06G095400' => 'gma', 'Glyma.07G189800' => 'gma', 'Glyma.08G059500' => 'gma', 'Glyma.10G021500' => 'gma', 'Glyma.11G227300' => 'gma', 'Glyma.14G062100' => 'gma', 'Glyma.14G179500' => 'gma', 'Glyma.16G050500' => 'gma', 'Glyma.16G146400' => 'gma', 'Glyma.18G030200' => 'gma', 'Glyma.19G100200' => 'gma', 'Glyma.19G206800' => 'gma', 'Gohir.A02G066700' => 'ghi', 'Gohir.A05G221800' => 'ghi', 'Gohir.A05G316300' => 'ghi', 'Gohir.A06G032656' => 'ghi', 'Gohir.A06G046101' => 'ghi', 'Gohir.A07G230600' => 'ghi', 'Gohir.A08G043800' => 'ghi', 'Gohir.A08G072700' => 'ghi', 'Gohir.A08G116400' => 'ghi', 'Gohir.A10G021200' => 'ghi', 'Gohir.A10G229500' => 'ghi', 'Gohir.A11G063300' => 'ghi', 'Gohir.A11G117600' => 'ghi', 'Gohir.A12G057366' => 'ghi', 'Gohir.D02G072600' => 'ghi', 'Gohir.D04G066700' => 'ghi', 'Gohir.D05G224600' => 'ghi', 'Gohir.D06G033000' => 'ghi', 'Gohir.D06G170200' => 'ghi', 'Gohir.D07G237900' => 'ghi', 'Gohir.D08G053432' => 'ghi', 'Gohir.D08G080700' => 'ghi', 'Gohir.D08G137200' => 'ghi', 'Gohir.D10G022000' => 'ghi', 'Gohir.D10G243500' => 'ghi', 'Gohir.D11G067000' => 'ghi', 'Gohir.D11G122500' => 'ghi', 'Gorai.001G273700' => 'gra', 'Gorai.004G053500' => 'gra', 'Gorai.004G085900' => 'gra', 'Gorai.004G140500' => 'gra', 'Gorai.005G081800' => 'gra', 'Gorai.007G072400' => 'gra', 'Gorai.007G131300' => 'gra', 'Gorai.009G232000' => 'gra', 'Gorai.010G036400' => 'gra', 'Gorai.011G023100' => 'gra', 'Gorai.011G279900' => 'gra', 'Gorai.012G075700' => 'gra', 'GSVIVG01000962001' => 'vvi', 'GSVIVG01003183001' => 'vvi', 'GSVIVG01003791001' => 'vvi', 'GSVIVG01009126001' => 'vvi', 'GSVIVG01010995001' => 'vvi', 'GSVIVG01016368001' => 'vvi', 'GSVIVG01021910001' => 'vvi', 'GSVIVG01023363001' => 'vvi', 'GSVIVG01024477001' => 'vvi', 'GSVIVG01024757001' => 'vvi', 'GSVIVG01031395001' => 'vvi', 'GSVIVG01033011001' => 'vvi', 'HanXRQChr01g0002011' => 'han', 'HanXRQChr02g0047061' => 'han', 'HanXRQChr05g0144331' => 'han', 'HanXRQChr05g0163261' => 'han', 'HanXRQChr07g0202671' => 'han', 'HanXRQChr08g0218201' => 'han', 'HanXRQChr08g0222241' => 'han', 'HanXRQChr08g0233681' => 'han', 'HanXRQChr09g0251411' => 'han', 'HanXRQChr09g0251421' => 'han', 'HanXRQChr09g0263871' => 'han', 'HanXRQChr10g0283811' => 'han', 'HanXRQChr10g0283821' => 'han', 'HanXRQChr11g0340161' => 'han', 'HanXRQChr12g0362321' => 'han', 'HanXRQChr14g0436611' => 'han', 'HanXRQChr14g0459941' => 'han', 'HanXRQChr14g0459951' => 'han', 'HanXRQChr15g0466131' => 'han', 'HanXRQChr15g0485351' => 'han', 'Haze_04824' => 'cav', 'Haze_06580' => 'cav', 'Haze_14929' => 'cav', 'Haze_17181' => 'cav', 'Haze_22351' => 'cav', 'Hma1.2p1_0026F.1_g017020' => 'hma', 'Hma1.2p1_0144F.1_g064600' => 'hma', 'Hma1.2p1_0209F.1_g089020' => 'hma', 'Hma1.2p1_0399F.1_g144160' => 'hma', 'Hma1.2p1_0525F.1_g172780' => 'hma', 'Hma1.2p1_0710F.1_g207320' => 'hma', 'Hma1.2p1_0710F.1_g207330' => 'hma', 'Hma1.2p1_0710F.1_g207340' => 'hma', 'Hma1.2p1_0710F.1_g207350' => 'hma', 'Hma1.2p1_0961F.1_g241740' => 'hma', 'Hma1.2p1_1182F.1_g264800' => 'hma', 'Hma1.2p1_2093F.1_g313880' => 'hma', 'Hma1.2p1_2093F.1_g313890' => 'hma', 'Hma1.2p1_2600F.1_g325180' => 'hma', 'Hma1.2p1_3382F.1_g335730' => 'hma', 'HPP92_009250' => 'vpl', 'HPP92_009331' => 'vpl', 'HPP92_018193' => 'vpl', 'HPP92_027342' => 'vpl', 'Hund05378' => 'sun', 'Hund07008' => 'sun', 'Hund12876' => 'sun', 'Hund13831' => 'sun', 'Hund15983' => 'sun', 'Hund16876' => 'sun', 'Hund21278' => 'sun', 'Hund21663' => 'sun', 'Hund27000' => 'sun', 'Lalb_Chr04g0259711' => 'lal', 'Lalb_Chr09g0327321' => 'lal', 'Lalb_Chr10g0102651' => 'lal', 'Lalb_Chr10g0105021' => 'lal', 'Lalb_Chr11g0065141' => 'lal', 'Lalb_Chr14g0363901' => 'lal', 'Lalb_Chr15g0078761' => 'lal', 'Lalb_Chr15g0084311' => 'lal', 'Lalb_Chr16g0383401' => 'lal', 'Lalb_Chr17g0344371' => 'lal', 'Lalb_Chr17g0346591' => 'lal', 'Lalb_Chr18g0047471' => 'lal', 'Lalb_Chr21g0316911' => 'lal', 'Lj1C38T0' => 'lonja', 'Lj1C950G16' => 'lonja', 'Lj1g0001755' => 'lja', 'Lj1g0006513' => 'lja', 'Lj1g0015670' => 'lja', 'Lj1g0027142' => 'lja', 'Lj2A1186T33' => 'lonja', 'Lj3g0010583' => 'lja', 'Lj4A92T67' => 'lonja', 'Lj4g0012889' => 'lja', 'Lj5g0004781' => 'lja', 'Lj6g0020395' => 'lja', 'Lj7A615T37' => 'lonja', 'Lj8C72G3' => 'lonja', 'LjContig00357g0020173' => 'lja', 'Lsat_1_v5_gn_0_18361' => 'lsa', 'Lsat_1_v5_gn_0_45201' => 'lsa', 'Lsat_1_v5_gn_1_126900' => 'lsa', 'Lsat_1_v5_gn_1_2380' => 'lsa', 'Lsat_1_v5_gn_2_122000' => 'lsa', 'Lsat_1_v5_gn_2_45640' => 'lsa', 'Lsat_1_v5_gn_4_177421' => 'lsa', 'Lsat_1_v5_gn_4_56881' => 'lsa', 'Lsat_1_v5_gn_4_93701' => 'lsa', 'Lsat_1_v5_gn_5_188920' => 'lsa', 'Lsat_1_v5_gn_6_116500' => 'lsa', 'Lsat_1_v5_gn_7_19521' => 'lsa', 'Lsat_1_v5_gn_8_12401' => 'lsa', 'Lsat_1_v5_gn_8_154861' => 'lsa', 'Lsat_1_v5_gn_8_51740' => 'lsa', 'Lsat_1_v5_gn_8_54220' => 'lsa', 'Lsat_1_v5_gn_9_16801' => 'lsa', 'Lsat_1_v5_gn_9_33341' => 'lsa', 'Lsat_1_v5_gn_9_4820' => 'lsa', 'Lsat_1_v5_gn_9_61461' => 'lsa', 'Manes.01G214300' => 'mes', 'Manes.02G147400' => 'mes', 'Manes.04G091500' => 'mes', 'Manes.05G067800' => 'mes', 'Manes.07G125200' => 'mes', 'Manes.10G017900' => 'mes', 'Manes.11G078600' => 'mes', 'Manes.16G020400' => 'mes', 'Manes.18G061800' => 'mes', 'Mapoly0025s0025' => 'mpo', 'Mapoly0035s0062' => 'mpo', 'MBI01_g17908_MAGBIO' => 'mbi', 'MBI02_g01116_MAGBIO' => 'mbi', 'MBI02_g18291_MAGBIO' => 'mbi', 'MBI02_g47451_MAGBIO' => 'mbi', 'MBI05_g24442_MAGBIO' => 'mbi', 'MBI07_g36279_MAGBIO' => 'mbi', 'MBI14_g36882_MAGBIO' => 'mbi', 'MBI14_g36883_MAGBIO' => 'mbi', 'MBI15_g41441_MAGBIO' => 'mbi', 'MBI18_g33255_MAGBIO' => 'mbi', 'MD01G1147000' => 'mdo', 'MD03G1276700' => 'mdo', 'MD05G1325800' => 'mdo', 'MD07G1213600' => 'mdo', 'MD07G1213800' => 'mdo', 'MD08G1192000' => 'mdo', 'MD08G1228400' => 'mdo', 'MD09G1005000' => 'mdo', 'MD10G1303700' => 'mdo', 'MD11G1299000' => 'mdo', 'MD15G1380700' => 'mdo', 'MD17G1009000' => 'mdo', 'Medtr0219s0040' => 'mtr', 'Medtr1g088950' => 'mtr', 'Medtr3g070140' => 'mtr', 'Medtr3g100860' => 'mtr', 'Medtr4g091290' => 'mtr', 'Medtr5g065490' => 'mtr', 'Medtr5g081870' => 'mtr', 'Medtr5g086490' => 'mtr', 'Medtr7g083610' => 'mtr', 'Medtr8g098695' => 'mtr', 'MELO3C003538.2' => 'cme', 'MELO3C003539.2' => 'cme', 'MELO3C007323.2' => 'cme', 'MELO3C014799.2' => 'cme', 'MELO3C015898.2' => 'cme', 'MELO3C025152.2' => 'cme', 'MELO3C027177.2' => 'cme', 'MELO3C028673.2' => 'cme', 'MELO3C033147.2' => 'cme', 'Migut.D00151' => 'egut', 'Migut.F00020' => 'egut', 'Migut.F00706' => 'egut', 'Migut.F01428' => 'egut', 'Migut.H01518' => 'egut', 'Migut.K01481' => 'egut', 'Migut.M01216' => 'egut', 'Migut.N01403' => 'egut', 'MSTRG.12595' => 'ama', 'MSTRG.14676' => 'ama', 'MSTRG.18189' => 'ama', 'MSTRG.21599' => 'ama', 'MSTRG.230' => 'ama', 'MSTRG.24118' => 'ama', 'MSTRG.27350' => 'ama', 'MSTRG.7287' => 'ama', 'MSTRG.8309' => 'ama', 'MSTRG.8974' => 'ama', 'Nitab4.5_0000053g0050' => 'nta', 'Nitab4.5_0000110g0400' => 'nta', 'Nitab4.5_0000190g0020' => 'nta', 'Nitab4.5_0000369g0040' => 'nta', 'Nitab4.5_0000519g0220' => 'nta', 'Nitab4.5_0000559g0290' => 'nta', 'Nitab4.5_0000737g0010' => 'nta', 'Nitab4.5_0000824g0070' => 'nta', 'Nitab4.5_0001740g0150' => 'nta', 'Nitab4.5_0002093g0180' => 'nta', 'Nitab4.5_0002100g0140' => 'nta', 'Nitab4.5_0002727g0060' => 'nta', 'Nitab4.5_0002977g0070' => 'nta', 'Nitab4.5_0003151g0020' => 'nta', 'Nitab4.5_0003288g0100' => 'nta', 'Nitab4.5_0003614g0030' => 'nta', 'Nitab4.5_0004150g0060' => 'nta', 'Nitab4.5_0005161g0090' => 'nta', 'Nitab4.5_0006674g0010' => 'nta', 'Nitab4.5_0007017g0010' => 'nta', 'Nitab4.5_0007518g0060' => 'nta', 'Nitab4.5_0007752g0050' => 'nta', 'Nitab4.5_0008145g0010' => 'nta', 'Nitab4.5_0009433g0030' => 'nta', 'Nitab4.5_0011300g0010' => 'nta', 'Nitab4.5_0012015g0030' => 'nta', 'Nn005s41407' => 'nnu', 'Nn1g03880' => 'nnu', 'Nn1g05060' => 'nnu', 'Nn1g05495' => 'nnu', 'Nn1g06776' => 'nnu', 'Nn2g11379' => 'nnu', 'Nn2g13617' => 'nnu', 'Nn2g14875' => 'nnu', 'Nn2g16000' => 'nnu', 'Nn2g16002' => 'nnu', 'Nn3g21300' => 'nnu', 'Nn4g22191' => 'nnu', 'Nn4g26020' => 'nnu', 'Nn5g28391' => 'nnu', 'Nn5g29948' => 'nnu', 'Nn6g31902' => 'nnu', 'Nn7g38017' => 'nnu', 'Oeu006651.1' => 'oeu', 'Oeu006652.1' => 'oeu', 'Oeu013477.1' => 'oeu', 'Oeu014711.1' => 'oeu', 'Oeu027996.1' => 'oeu', 'Oeu029762.1' => 'oeu', 'Oeu036685.1' => 'oeu', 'Oeu036686.1' => 'oeu', 'Oeu038210.1' => 'oeu', 'Oeu038212.1' => 'oeu', 'Oeu038997.1' => 'oeu', 'Oeu039788.1' => 'oeu', 'Oeu045585.1' => 'oeu', 'Oeu047472.1' => 'oeu', 'Oeu047915.2' => 'oeu', 'Oeu047976.1' => 'oeu', 'Oeu055827.1' => 'oeu', 'Oeu057560.2' => 'oeu', 'Oeu059751.1' => 'oeu', 'Oeu062568.4' => 'oeu', 'Os01g0853400' => 'osa', 'Os02g0759700' => 'osa', 'Os03g0187500' => 'osa', 'Os03g0265500' => 'osa', 'Os04g0395600' => 'osa', 'Os05g0150500' => 'osa', 'Os05g0449500' => 'osa', 'Os11g0462900' => 'osa', 'Os11g0515500' => 'osa', 'Peaxi162Scf00067g00620' => 'pax', 'Peaxi162Scf00139g00098' => 'pax', 'Peaxi162Scf00141g01430' => 'pax', 'Peaxi162Scf00401g00117' => 'pax', 'Peaxi162Scf00420g00736' => 'pax', 'Peaxi162Scf00450g00125' => 'pax', 'Peaxi162Scf00535g00618' => 'pax', 'Peaxi162Scf00619g00910' => 'pax', 'Peaxi162Scf00936g00015' => 'pax', 'Peaxi162Scf00957g00321' => 'pax', 'Peaxi162Scf01039g00028' => 'pax', 'PGR004G0904' => 'pgr', 'PGR031G1714' => 'pgr', 'PGR042G0111' => 'pgr', 'PGR044G1911' => 'pgr', 'PGR044G2028' => 'pgr', 'PGR083G2132' => 'pgr', 'PGR142G3681' => 'pgr', 'PGSC0003DMG400002118' => 'stu', 'PGSC0003DMG400003405' => 'stu', 'PGSC0003DMG400005348' => 'stu', 'PGSC0003DMG400011353' => 'stu', 'PGSC0003DMG400020729' => 'stu', 'PGSC0003DMG400021996' => 'stu', 'PGSC0003DMG400022404' => 'stu', 'PGSC0003DMG400024033' => 'stu', 'PGSC0003DMG400027712' => 'stu', 'PGSC0003DMG400028072' => 'stu', 'PGSC0003DMG400042787' => 'stu', 'Phvul.001G087000' => 'pvu', 'Phvul.001G202600' => 'pvu', 'Phvul.001G240400' => 'pvu', 'Phvul.002G221400' => 'pvu', 'Phvul.007G166200' => 'pvu', 'Phvul.008G179000' => 'pvu', 'Phvul.008G226500' => 'pvu', 'Potri.001G323100' => 'ptr', 'Potri.002G102700' => 'ptr', 'Potri.002G207800' => 'ptr', 'Potri.004G033900' => 'ptr', 'Potri.005G159300' => 'ptr', 'Potri.008G064400' => 'ptr', 'Potri.010G192900' => 'ptr', 'Potri.011G042400' => 'ptr', 'Potri.014G134800' => 'ptr', 'Potri.017G061600' => 'ptr', 'Pp3c15_1200' => 'ppa', 'Pp3c17_7680' => 'ppa', 'Pp3c18_16630' => 'ppa', 'Pp3c20_17150' => 'ppa', 'Pp3c20_4050' => 'ppa', 'Pp3c22_6020' => 'ppa', 'Pp3c23_11300' => 'ppa', 'Pp3c23_18960' => 'ppa', 'Pp3c23_5870' => 'ppa', 'Pp3c24_9800' => 'ppa', 'Pp3c24_9814' => 'ppa', 'Pp3c3_35570' => 'ppa', 'Pp3c3_8580' => 'ppa', 'Pp3c9_10120' => 'ppa', 'Pp3c9_1680' => 'ppa', 'Pp3c9_1690' => 'ppa', 'Prupe.1G526900' => 'ppe', 'Prupe.2G246000' => 'ppe', 'Prupe.3G311800' => 'ppe', 'Prupe.4G037200' => 'ppe', 'Prupe.4G037400' => 'ppe', 'Prupe.8G253300' => 'ppe', 'Psat2g035120' => 'psa', 'Psat2g067640' => 'psa', 'Psat3g024480' => 'psa', 'Psat3g094360' => 'psa', 'Psat6g167560' => 'psa', 'Psat7g108680' => 'psa', 'PSO017G6168' => 'pso', 'PSO063G7135' => 'pso', 'PSO170G0064' => 'pso', 'PSO170G0249' => 'pso', 'PSO210G0329' => 'pso', 'PSO210G3269' => 'pso', 'PSO210G3777' => 'pso', 'PSO229G0012' => 'pso', 'PSO339G0923' => 'pso', 'PSO339G6127' => 'pso', 'PSO384G0772' => 'pso', 'PSO478G5106' => 'pso', 'PSO541G2027' => 'pso', 'PSO541G5574' => 'pso', 'PSO560G0001' => 'pso', 'PSO675G6298' => 'pso', 'PSO675G7378' => 'pso', 'PSO801G0790' => 'pso', 'PSO832G3047' => 'pso', 'QL02p070041' => 'qlo', 'QL04p018210' => 'qlo', 'QL08p062617' => 'qlo', 'QL09p016964' => 'qlo', 'QL11p016097' => 'qlo', 'QL12p024227' => 'qlo', 'RcHm_v2.0_Chr1g0369351' => 'rch', 'RcHm_v2.0_Chr1g0369371' => 'rch', 'RcHm_v2.0_Chr1g0369381' => 'rch', 'RcHm_v2.0_Chr2g0176311' => 'rch', 'RcHm_v2.0_Chr4g0403301' => 'rch', 'RcHm_v2.0_Chr5g0002501' => 'rch', 'RcHm_v2.0_Chr5g0047701' => 'rch', 'RcHm_v2.0_Chr5g0056611' => 'rch', 'RcHm_v2.0_Chr5g0072941' => 'rch', 'RcHm_v2.0_Chr6g0292661' => 'rch', 'RcHm_v2.0_Chr7g0237651' => 'rch', 'Rhsim01G0280500' => 'rsi', 'Rhsim03G0139900' => 'rsi', 'Rhsim07G0209300' => 'rsi', 'Rhsim09G0172200' => 'rsi', 'Rhsim10G0002100' => 'rsi', 'Rhsim12G0019600' => 'rsi', 'Rhsim12G0020000' => 'rsi', 'Rhsim13G0169700' => 'rsi', 'Sabra02G0080600' => 'sbr', 'Sabra04G0019700' => 'sbr', 'Sabra05G0121200' => 'sbr', 'Sabra08G0047300' => 'sbr', 'Sabra10G0148500' => 'sbr', 'Sabra11G0029100' => 'sbr', 'Sabra14G0100500' => 'sbr', 'Sabra16G0205000' => 'sbr', 'Sabra17G0054600' => 'sbr', 'SalBow3G4587' => 'sbo', 'SalBow4G3086' => 'sbo', 'SalBow6G2157' => 'sbo', 'SalBow6G2780' => 'sbo', 'SalBow6G3067' => 'sbo', 'SalBow6G5954' => 'sbo', 'SalBow6G6630' => 'sbo', 'SalBow7G0020' => 'sbo', 'SalBow7G0316' => 'sbo', 'SalBow8G2641' => 'sbo', 'Sc01g0000990' => 'sci', 'Sc07g0003680' => 'sci', 'Sc11g0007280' => 'sci', 'Sc16g0008180' => 'sci', 'Sc17g0006650' => 'sci', 'Sed0000454' => 'sed', 'Sed0000697' => 'sed', 'Sed0011067' => 'sed', 'Sed0011762' => 'sed', 'Sed0013767' => 'sed', 'Sed0016382' => 'sed', 'Sed0018467' => 'sed', 'Sed0021136' => 'sed', 'Sed0021219' => 'sed', 'Sed0021946' => 'sed', 'Sed0024455' => 'sed', 'SEGI_07452' => 'sgi', 'SEGI_07535' => 'sgi', 'SEGI_19931' => 'sgi', 'SEGI_29062' => 'sgi', 'SGA_v2.0_scaffold172G39066' => 'sas', 'SGA_v2.0_scaffold1G00422' => 'sas', 'SGA_v2.0_scaffold221G42711' => 'sas', 'SGA_v2.0_scaffold253G45153' => 'sas', 'SGA_v2.0_scaffold2G01062' => 'sas', 'SGA_v2.0_scaffold34G13694' => 'sas', 'SGA_v2.0_scaffold36G14358' => 'sas', 'SGA_v2.0_scaffold44G16945' => 'sas', 'SGA_v2.0_scaffold4501G54494' => 'sas', 'SGA_v2.0_scaffold47G17628' => 'sas', 'SGA_v2.0_scaffold7G03944' => 'sas', 'SMO116G0026' => 'smo', 'SMO174G0051' => 'smo', 'SMO329G0001' => 'smo', 'SMO347G0108' => 'smo', 'SMO351G0031' => 'smo', 'SMO367G1099' => 'smo', 'SMO367G1225' => 'smo', 'Solyc02g079190.3' => 'sly', 'Solyc04g074980.3' => 'sly', 'Solyc05g009260.1' => 'sly', 'Solyc06g007840.2' => 'sly', 'Solyc06g008440.1' => 'sly', 'Solyc06g008460.3' => 'sly', 'Solyc06g008470.3' => 'sly', 'Solyc06g008780.3' => 'sly', 'Solyc06g008810.3' => 'sly', 'Solyc09g074520.3' => 'sly', 'Sopen02g023990' => 'spe', 'Sopen04g029930' => 'spe', 'Sopen05g031150' => 'spe', 'Sopen06g003580' => 'spe', 'Sopen09g029360' => 'spe', 'Sp1g11390' => 'spa', 'Sp2g15950' => 'spa', 'Sp4g22250' => 'spa', 'Sp5g00540' => 'spa', 'Sp6g03220' => 'spa', 'Sp7g22370' => 'spa', 'TAR365G0986' => 'tar', 'TAR369G0771' => 'tar', 'TAR374G1121' => 'tar', 'TAR376G0793' => 'tar', 'TAR381G1617' => 'tar', 'TAR622G0077' => 'tar', 'TAR623G0501' => 'tar', 'TAR623G0817' => 'tar', 'TAR623G1129' => 'tar', 'TAR625G0179' => 'tar', 'TAR626G1383' => 'tar', 'TAR627G0428' => 'tar', 'TAR628G1267' => 'tar', 'TAR629G1780' => 'tar', 'TAR629G2511' => 'tar', 'TAR636G0997' => 'tar', 'TAR636G1115' => 'tar', 'TAR636G1941' => 'tar', 'THA.LOC104801198' => 'tha', 'THA.LOC104802204' => 'tha', 'THA.LOC104803425' => 'tha', 'THA.LOC104805311' => 'tha', 'THA.LOC104806471' => 'tha', 'THA.LOC104806754' => 'tha', 'THA.LOC104809767' => 'tha', 'THA.LOC104810070' => 'tha', 'THA.LOC104817526' => 'tha', 'THA.LOC104823994' => 'tha', 'THA.LOC104824304' => 'tha', 'Thecc.01G291300' => 'tca', 'Thecc.04G044600' => 'tca', 'Thecc.06G199900' => 'tca', 'Thecc.06G200000' => 'tca', 'Thecc.08G066700' => 'tca', 'Thecc.10G026300' => 'tca', 'Thhalv10003903m.g' => 'esa', 'Thhalv10005852m.g' => 'esa', 'Thhalv10007195m.g' => 'esa', 'Thhalv10016416m.g' => 'esa', 'Thhalv10024671m.g' => 'esa', 'Thhalv10024672m.g' => 'esa', 'Thhalv10027610m.g' => 'esa', 'Thhalv10028532m.g' => 'esa', 'TPR.G16918' => 'tpr', 'TPR.G25685' => 'tpr', 'TPR.G26035' => 'tpr', 'TPR.G29809' => 'tpr', 'TPR.G31832' => 'tpr', 'TPR.G31837' => 'tpr', 'TPR.G4679' => 'tpr', 'TPR.G5747' => 'tpr', 'TPR.G8039' => 'tpr', 'TWI09G0590' => 'twi', 'TWI14G0840' => 'twi', 'TWI23G0500' => 'twi', 'TWI32G0717' => 'twi', 'TWI36G1046' => 'twi', 'TWI38G0966' => 'twi', 'TWI39G0777' => 'twi', 'TWI56G1357' => 'twi', 'TWI60G0927' => 'twi', 'TWI63G1175' => 'twi', 'TWI73G0561' => 'twi', 'unitig_0.g1626' => 'ugi', 'unitig_0.g1627' => 'ugi', 'unitig_22.g5247' => 'ugi', 'unitig_26.g10166' => 'ugi', 'unitig_26.g9373' => 'ugi', 'unitig_749.g13639' => 'ugi', 'unitig_749.g13640' => 'ugi', 'vmacro01031' => 'vma', 'vmacro03807' => 'vma', 'vmacro04681' => 'vma', 'vmacro06996' => 'vma', 'vmacro06997' => 'vma', 'vmacro09907' => 'vma', 'vmacro10063' => 'vma', 'vmacro14970' => 'vma', 'vmacro22237' => 'vma', 'vmacro22332' => 'vma', 'vmacro22633' => 'vma', 'VMungo0251G2051' => 'vmu', 'VMungo0647G1455' => 'vmu', 'VMungo0647G1490' => 'vmu', 'VMungo0720G1608' => 'vmu', 'VMungo1383G0470' => 'vmu', 'VMungo1383G2540' => 'vmu', 'VMungo1383G2727' => 'vmu', 'VMungo1383G3183' => 'vmu', 'Zm00001eb006610' => 'zma', 'Zm00001eb011780' => 'zma', 'Zm00001eb085030' => 'zma', 'Zm00001eb113030' => 'zma', 'Zm00001eb147720' => 'zma', 'Zm00001eb193850' => 'zma', 'Zm00001eb255540' => 'zma', 'Zm00001eb271830' => 'zma', 'Zm00001eb288770' => 'zma', 'Zm00001eb347860' => 'zma', 'Zm00001eb354200' => 'zma', 'Zm00001eb367310' => 'zma', 'Zm00001eb397990' => 'zma', 'Zm00001eb401510' => 'zma', 'Zm00001eb421340' => 'zma' ) $gf_id = 'HOM05D000530' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000530' ) $data_identifier = 'HOM05D000530' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 5, 'aag' => (int) 2, 'ach' => (int) 19, 'amhyb' => (int) 4, 'aly' => (int) 8, 'aox' => (int) 13, 'arhy' => (int) 20, 'ath' => (int) 7, 'atr' => (int) 4, 'acertr' => (int) 6, 'cqu' => (int) 15, 'bca' => (int) 35, 'bol' => (int) 18, 'bra' => (int) 15, 'can' => (int) 30, 'cansat' => (int) 4, 'chi' => (int) 7, 'cru' => (int) 7, 'car' => (int) 7, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 9, 'cla' => (int) 6, 'col' => (int) 8, 'cpa' => (int) 5, 'csa' => (int) 6, 'camsi' => (int) 10, 'dca' => (int) 15, 'din' => (int) 12, 'dzi' => (int) 11, 'eca' => (int) 14, 'bvu' => (int) 6, 'egr' => (int) 5, 'fan' => (int) 17, 'fve' => (int) 4, 'gma' => (int) 18, 'ghi' => (int) 27, 'gra' => (int) 12, 'vvi' => (int) 12, 'han' => (int) 20, 'cav' => (int) 5, 'hma' => (int) 15, 'vpl' => (int) 4, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 6, 'lja' => (int) 9, 'lsa' => (int) 20, 'mes' => (int) 9, 'mpo' => (int) 2, 'mbi' => (int) 10, 'mdo' => (int) 12, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 8, 'ama' => (int) 10, 'nta' => (int) 26, 'nnu' => (int) 17, 'oeu' => (int) 20, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 16, 'ppe' => (int) 6, 'psa' => (int) 6, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 11, 'rsi' => (int) 8, 'sbr' => (int) 9, 'sbo' => (int) 10, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 4, 'sas' => (int) 11, 'smo' => (int) 7, 'sly' => (int) 10, 'spe' => (int) 5, 'spa' => (int) 6, 'tar' => (int) 18, 'tha' => (int) 11, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 9, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 11, 'vmu' => (int) 8, 'zma' => (int) 15 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb421340' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1